The following are some of the publications I have edited most recently, or publication of which I only discovered recently. A more complete list can be downloaded here. For a relatively complete list of journals in which these papers have been published, see the Journal List page.
1,166. Ishikawa, Ken and Shigeaki Saitoh. 2025. Proliferation Analyses of Conditional Knockdown Strains Using CRISPR Interference in Fission Yeast. Methods in Molecular Biology. DOI
1,165. Yoshinari, Yuto, Takashi Nishimura, Taishi Yoshii, Shu Kondo, Hiromu Tanimoto, Tomoe Kobayashi, Makoto Matsuyama and Ryusuke Niwa. 2024. A high-protein diet-responsive gut hormone regulates behavioral and metabolic optimization in Drosophila melanogaster. Nature Communications. DOI
1,164. Lee, Chung-Yen, Yosuke Nabeshima, Tetsuji Kitano, Li-Tan Yang and Masaaki Takeuchi. 2024. Diagnostic Accuracy and Prognostic Value of Relative Apical Sparing in Cardiac Amyloidosis - Systematic Review and Meta-Analysis. Circulation Journal. DOI
1,163. Kuroki, Masashi, Hirofumi Shibata, Kazuhiro Kobayashi, Manato Matsubara, Saki Akita, Tatsuhiko Yamada, Rina Kato, Ryota Iinuma, Ryo Kawaura, Hiroshi Okuda, Kenichi Mori, Natsuko Ueda, Tatsuhiko Miyazaki and Takenori Ogawa. 2024. Postoperative pathological findings and prognosis of early laryngeal and pharyngeal cancer treated with transoral surgery. Auris Nasus Larynx. DOI
1,162. Hongo, Yayoi, Daisuke Fukuyama, Lee Chuin Chen, Kanako Sekimoto and Hiroshi Watanabe. 2025. Ghost Peaks of Aromatic Metabolites Induced by Corona Discharge Artifacts in LC-ESI-MS/MS. Journal of Mass Spectrometry. DOI
1,161. Furukawa, Yutaro, Takaomi Kobayashi, Shogo Narumi, Mayuko Koba, Hiroyuki Koami and Yuichiro Sakamoto. 2024. Deep vein thrombosis in response to stress induced by earthquakes in Japan: a meta-analysis of possible exacerbating factors. Scientific Reports. DOI
1,160. Koami, H., et al. (2025). Effect of hypofibrinolysis on clinical outcomes of patients with septic disseminated intravascular coagulation. Thrombosis Research 245. DOI
1,159. Yoshioka, Yuki, Megumi Kanai, Shogo Gishitomi, Nana Arakaki, Tatsuki Koido, Chuya Shinzato, Jun Inoue, Tomofumi Nagata, and Noriyuki Satoh. 2024. Extensive mitochondrial genomic analyses reveal dynamic gene order rearrangements in the class Octocorallia (Cnidaria: Anthozoa). Gene Reports: 102111. DOI
1,158. Yoshioka, Yuki, Fumihiko Nagata, Masanori Nonaka and Noriyuki Satoh. 2024. Molecular phylogenetic position of the family Fungiidae (Cnidaria: Anthozoa) based on complete mitochondrial genome sequences. Galaxea, Journal of Coral Reef Studies. DOI
1,157. Gibu, Kodai, Nanami Mizusawa, Mariko Iijima, Yoshikazu Ohno, Jun Yasumoto, Ko Yasumoto and Akira Iguchi. 2024. Polyamine impact on physiology of early stages of reef-building corals–insights from rearing experiments and RNA-Seq analysis. Scientific Reports. DOI
1,156. Matsumura, Guren, Satoko Honda, Takamasa Kikuchi, Yuuki Mizuno, Hyuga Hara, Yoshiki Kondo, Haruki Nakamura, Shin Watanabe, Kiyoshi Hayakawa, Kohei Nakajima and Kuniharu Takei. 2024. Real-time personal healthcare data analysis using edge computing for multimodal wearable sensors. Device. DOI
1,155. Ikeuchi, Eri, Akira Iguchi, Takashi Nakamura and Hironobu Fukami. 2024. Seasonal variation of grazing scars on massive Porites corals in Sekisei Lagoon, Okinawa, Japan. Galaxea, Journal of Coral Reef Studies. DOI
1,154. Inada, Shunko A. 2024. Biochips to measure ultraviolet light absorption by leukemia cells. Japanese Journal of Applied Physics. DOI
1,153. Taguchi, Yuki, Takeo Nakaya, Kenichi Aizawa, Yoshiyuki Noguchi, Nobuhiko Maiya, Chisako Iwamoto, Kenichi Ohba, Minoru Sugawara, Masayuki Murata, Ryozo Nagai and Fumi Kano. 2024. Peptide mimetic NC114 induces growth arrest by preventing PKCδ activation and FOXM1 nuclear translocation in colorectal cancer cells. FEBS Open Biology. DOI
1,152. Tran, Thi Hong Nguyen, Ritsuko Takada, Elena Krayukhina, Takahiro Maruno, Yusuke Mii, Susumu Uchiyama and Shinji Takada. 2024. Soluble Frizzled-related proteins promote exosome-mediated Wnt re-secretion. Communications Biology. DOI
1,151. Maeda, Hiroaki, Yuta Sudo, Sayoko Nagashima, Kenji Takada, Naoya Fukui, Hiroyasu Masunaga, Sono Sasaki and Hiroshi Nishihara. 2024. Bis(diimino)nickel Coordination Nanosheets Modified with Triptycene Moieties for Facile Exfoliation and Enhanced Hydrogen Evolution Catalytic Activity. ACS Applied Nano Materials. DOI
1,150. Wu, Heng, Yosuke Yamada, Po-Shun Chuang, Kota Ishikawa and Satoshi Mitarai. 2024. Effects of flows on transparent exopolymer particles released from branching Acropora coral colonies. Frontiers in Marine Science.
1,149. Nishi, Katsuyuki, Taro Sakamaki, Akiomi Nagasaka, Kevin S. Kao, Kay Sadaoka, Masahide Asano, Nobuyuki Yamamoto, Akifumi Takaori-Kondo and Masanori Miyanishi. 2024. Alteration of long and short-term hematopoietic stem cell ratio causes myeloid-biased hematopoiesis. eLife. DOI
1,148. Mori, Shigeta, Yoko Kurosawa, Yutaka Maruyama, Satoshi Kikuchi, Juan Pedro Ferrio, Atsushi Ishida and Keiko Yamaji. 2024. Cryptic Japanese maple species exhibit different drought tolerance, suggesting reproductive isolation. Ecological Research. DOI
1,147. Mikawa, Takumi, Kazumichi Yoshida and Hiroshi Kondoh. 2024. Senotherapy preserves resilience in aging. Geriatrics & Gerontology International. DOI
1,146. Kondo, Hirohito M., Elena Gheorghiu and Ana P. Pinheiro. 2024. Malleability and fluidity of time perception. Scientific Reports. DOI
1,145. Yamamoto, Yukiya, Sachiko Iba, Yoko Inaguma, Akinao Okamoto and Akihiro Abe. 2024. ELC52: a novel megakaryocytic leukemia cell line with a CALR type 1 mutation. Leukemia. DOI
1,144. Barman, Barun Kumar, Hiroyuki Yamada, Keisuke Watanabe, Kenzo Deguchi, Shinobu Ohki, Kenjiro Hashi, Atsushi Goto and Tadaaki Nagao. 2024. Rare-Earth-Metal-Free Solid-State Fluorescent Carbonized-Polymer Microspheres for Unclonable Anti-Counterfeit Whispering-Gallery Emissions from Red to Near-Infrared Wavelengths. Advanced Science. DOI
1,143. Guzman, Christine, Kurato Mohri, Ryotaro Nakamura, Minato Miyake, Yuko Tsuchiya, Kentaro Tomii and Hiroshi Watanabe. 2024. Neuronal and non-neuronal functions of the synaptic cell adhesion molecule neurexin in Nematostella vectensis. Nature Communications. DOI
1,142. Oka, Taiki, Takatomi Kubo, Nao Kobayashi, Misa Murakami, Toshinori Chiba and Aurelio Cortese. 2024. Decoding and modifying dynamic attentional bias in gaming disorder. Philosophical Transactions of the Royal Society B: Biological Sciences. DOI
1,141. Ohno, Yoshikazu, Anan Takahashi, Motosuke Tsutsumi, Azusa Kubota, Akira Iguchi, Mariko Iijima, Nanami Mizusawa, Takashi Nakamura, Atsushi Suzuki, Michio Suzuki, Jun Yasumoto, Shugo Watabe, Kazuhiko Sakai, Tomomi Nemoto and Ko Yasumoto. 2024. Live imaging of center of calcification formation during septum development in primary polyps of Acropora digitifera. Frontiers in Marine Science. DOI
1,140. Maeda, Ken, Hirozumi Kobayashi, Midori Iida and Hau Duc Tran. 2024. Taxonomy of freshwater gobies of the genus Rhinogobius (Oxudercidae, Gobiiformes) from central Vietnam, with descriptions of two new species. Zootaxa. DOI
1,139. Sarkar, Shukla, Naoyuki Taira, Tsung-Han Hsieh, Hsiao-Chiao Chien, Masato Hirota, Shin-ichi Koizumi, Daiki Sasaki, Miho Tamai, Yu Seto, Mio Miyagi and Hiroki Ishikawa. 2024. JunB is required for CD8+ T cell responses to acute infections. International Immunology. DOI
1,138. Ishikawa, Ken, Saeko Soejima, Takashi Nishimura and Shigeaki Saitoh. 2025. Arrayed CRISPRi library to suppress genes required for Schizosaccharomyces pombe viability. Journal of Cell Biology. DOI
1,137. Sakaguchi, Hiroshi, Takahiro Kojima, Yingbo Cheng, Shunpei Nobusue and Kazuhiro Fukami. 2024. Electrochemical on-surface synthesis of a strong electron-donating graphene nanoribbon catalyst. Nature Communications. DOI
1,136. Kondo, Hirohito M., Takeyuki Oba, Takahiro Ezaki, Takanori Kochiyama, Yasuhiro Shimada and Hideki Ohira. 2024. Striatal GABA levels correlate with risk sensitivity in monetary loss. Frontiers in Neuroscience. DOI
1,135. Tasima, Lidia Jorge, Eduardo Oliveira Venâncio de Lima, Daniela Miki Hatakeyama, Jarbas Prado Vidueiros, Daniel Rodrigues Stuginski, Kathleen Fernandes Grego and Anita Mitico Tanaka-Azevedo. 2024. Seasonality in Crotalus durissus venom. Toxicon. DOI
1,134. Kitano, Tetsuji, František Bartoš, Yosuke Nabeshima, Alex Ali Sayour, Attila Kovacs and Masaaki Takeuchi. 2024. Impact of Cardiac Magnetic Resonance-Derived Right Ventricular Ejection Fraction on Adverse Outcomes: A Robust Bayesian Model-Averaged Meta-Analysis. Journal of Cardiovascular Magnetic Resonance. DOI
1,133. Shikina, Shinya, Yin-Chu Cheng, Tzu-Chieh Lin, Yu-En Chang, Pin-Hsuan Tsai, Emma Chen, Yu-Chuan Chang, Yuen-Yi Leung, Yi-Chun Yu and Yi-Ling Chiu. 2024. Coral mariculture using abandoned abalone farming ponds in northeastern Taiwan. Aquaculture. DOI
1,132. Shikina, Shinya, Yuki Yoshioka, Yi-Ling Chiu, Taiga Uchida, Emma Chen, Yin-Chu Cheng, Tzu-Chieh Lin, Yu-Ling Chu, Miyuki Kanda, Mayumi Kawamitsu, Manabu Fujie, Takeshi Takeuchi, Yuna Zayasu, Noriyuki Satoh and Chuya Shinzato. 2024. Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp. Communications Biology. DOI
1,131. Shikina, Shinya, Pin-Hsuan Tsai, Yi-Ling Chiu and Ching-Fong Chang. 2024. The stony coral Fimbriaphyllia (Euphyllia) ancora’s reproductive strategy involves a sex change every year. Communications Biology. DOI
1,130. Sugiyama, Taisei, Shintaro Uehara and Jun Izawa. 2024. Meta-learning of human motor adaptation via the dorsal premotor cortex. Proceedings of the National Academy of Sciences. DOI
1,129. Nishioka, Sakiko, Kaede Miyata, Yasuaki Inoue, Kako Aoyama, Yuki Yoshioka, Natsuko Miura, Masayuki Yamane, Hiroshi Honda and Toshiyuki Takagi. 2024. Deciphering mechanisms of UV filter (benzophenone-3)- and high temperature-induced adverse effects in the coral Acropora tenuis, using ecotoxicogenomics. Science of The Total Environment. DOI
1,128. Chuang, Po-Shun, Tzu-Haw Wang, Chih-Ying Lu, Kshitij Tandon, Shinya Shikina and Sen-Lin Tang. 2024. Microbiome heterogeneity in tissues of the coral, Fimbriaphyllia (Euphyllia) ancora. Environmental Microbiology Reports. DOI
1,127. Noda, T., N. Satoh, E. Gittenberger and T. Asami. 2023. Left-Right Reversal Recurrently Evolved Regardless of Diaphanous-Related Formin Gene Duplication or Loss in Snails. Journal of Molecular Evolution. DOI
1,126. Hamada, Hiro Taiyo, Yoshifumi Abe, Norio Takata, Masakazu Taira, Kenji F Tanaka and Kenji Doya. 2024. Optogenetic activation of dorsal raphe serotonin neurons induces brain-wide activation. Nature Communications. DOI
1,125. El-Khoury, Rayane, Hiam Chemaitelly, Ahmed S Alaama, Joumana G Hermez, Nico Nagelkerke and Laith J. Abu-Raddad. 2024. Hepatitis C risk score as a tool to identify individuals with HCV infection: a demonstration and cross-sectional epidemiological study in Egypt. BMJ Open. DOI
1,124. Jo, Tomoyasu, Yasuyuki Arai, Kazuo Hatanaka, Hiroyuki Ishii, Akiko Ono, Nobuki Matsuyama, Jumpei Mori, Yangsook Koh, Fumihiro Azuma and Takafumi Kimura. 2023. Adverse effect of donor-specific anti-human leukocyte antigen (HLA) antibodies directed at HLA-DP/-DQ on engraftment in cord blood transplantation. Cytotherapy. DOI
1,123. Kuan, Kai-Yuan, Shu-Hao Yeh, Weitao Yang and Chao-Ping Hsu. 2024. Excited-State Charge Transfer Coupling from Quasiparticle Energy Density Functional Theory. The Journal of Physical Chemistry Letters. DOI
1,122. Hamamoto, Kohei, Akira Iguchi, Kodai Gibu, Hiroyuki Ozawa, Mari Kojima, Saki Mizuno, Yuki Yoshioka, Naoki Saito and Yoshihisa Fujita. 2024. Asymmetric genetic population structures at the range edges of a mangrove whelk. Science of the Total Environment. DOI
1,121. Utsumi, Hideko, Taijiro Yabe, Sumito Koshida, Akira Yamashita and Shinji Takada. 2024. Deficiency of mastl, a mitotic regulator, results in cell detachment from developing tissues of zebrafish embryos. Frontiers in Cell and Developmental Biology. DOI
1,120. Kurogi, Yoshitomo, Yosuke Mizuno, Takumi Kamiyama and Ryusuke Niwa. 2024. The intestinal stem cell/enteroblast-GAL4 driver, escargot-GAL4, also manipulates gene expression in the juvenile hormone-synthesizing organ of Drosophila melanogaster. Scientific Reports. DOI
1,119. Nigorikawa, Kiyomi, Yu Fukushima, Chinatsu Shimada, Daisuke Matsumoto and Wataru Nomura. 2024. CRISPRa Analysis of Phosphoinositide Phosphatases Shows That TMEM55A Is a Positive Regulator of Autophagy. Biological & Pharmaceutical Bulletin. DOI
1,118. Iguchi, Akira, Kodai Gibu, Makiko Yorifuji, Miyuki Nishijima, Atsushi Suzuki, Tsuneo Ono, Yukio Matsumoto, Mayuri Inoue, Masahiko Fujii, Daisuke Muraoka, Yamato Fujita and Hideki Takami. 2024. Transgenerational acclimation to acidified seawater and gene expression patterns in a sea urchin. Science of the Total Environment. DOI
1,117. Sheloukhova, Larisa and Hiroshi Watanabe. 2024. Evolution of glial cells: a non-bilaterian perspective. Neural Development. DOI
1,116. Nakamura, Naokazu, Tomoyasu Jo, Yasuyuki Arai, Toshio Kitawaki, Momoko Nishikori, Chisaki Mizumoto, Junya Kanda, Kouhei Yamashita, Miki Nagao and Akifumi Takaori-Kondo. 2024. Utilizing red blood cell distribution width (RDW) as a reliable biomarker to predict treatment effects after chimeric antigen receptor T cell therapy. Clin Exp Med. DOI
1,115. Jo, Tomoyasu, Yasuyuki Arai, Toshio Kitawaki, Naokazu Nakamura, Momoko Nishikori, Chisaki Mizumoto, Junya Kanda, Kouhei Yamashita, Miki Nagao and Akifumi Takaori-Kondo. 2024. KyoTox-e score; prediction of post-CAR-T prolonged thrombocytopenia using peripheral blood data before apheresis. Bone Marrow Transplantation. DOI
1,114. Yoshioka, Yuki, Yi-Ling Chiu, Taiga Uchida, Hiroshi Yamashita, Go Suzuki and Chuya Shinzato. 2023. Genes possibly related to symbiosis in early life stages of Acropora tenuis inoculated with Symbiodinium microadriaticum. Communications Biology. DOI
1,113. Ishida, Tasuku and Yutaka Satou. 2024. Ascidian embryonic cells with properties of neural-crest cells and neuromesodermal progenitors of vertebrates. Nature Ecology and Evolution. DOI
1,112. Aoki, Akino, Tomoyo Tamura, Kenji Hoshi and Kazuyoshi Gamada. 2024. Effect of unpredictable timing on the hip, knee, and ankle kinematics and center of mass during deceleration tasks. Journal of Sports Medicine and Physical Fitness. DOI
1,111. Wada, Makoto, Yusuke Yamamoto, Takayuki Hirai, Arisa Kubota, Naoto Takeura and Takahiro Adachi. 2024. Use of accelerometry to detect varus thrust of osteoarthritic knees before and one year after high tibial osteotomy. Journal of Orthopaedic Science. DOI
1,110. Takakura, Yuki, Moeka Machida, Natsumi Terada, Yuka Katsumi, Seika Kawamura, Kenta Horie, Maki Miyauchi, Tatsuya Ishikawa, Nobuko Akiyama, Takao Seki, Takahisa Miyao, Mio Hayama, Rin Endo, Hiroto Ishii, Yuya Maruyama, Naho Hagiwara, Tetsuya J Kobayashi, Naoto Yamaguchi, Hiroyuki Takano, Taishin Akiyama and Noritaka Yamaguchi. 2024. Mitochondrial protein C15ORF48 is a stress-independent inducer of autophagy that regulates oxidative stress and autoimmunity. Nature Communications. DOI
1,109. Kosaka, Naoko, Yusuke Umemiya, Naoto Endou, Tsuneko Kura, Hiroshi Matsubara, Masaki Hisada, Akinori Murata and Satoshi Mitarai. 2023. Simultaneous Observations of Atmosphere and Ocean Directly under Typhoons Using Autonomous Surface Vehicles. Scientific Online Letters on the Atmosphere. DOI
1,108. Inoue, Jun, Chuya Shinzato, Junya Hirai, Sachihiko Itoh, Yuki Minegishi, Shin-Ichi Ito and Susumu Hyodo. 2024. phyloBARCODER: A web tool for phylogenetic classification of eukaryote metabarcodes using custom reference databases. Molecular Biology and Evolution. DOI
1,107. Chiang, Hung-Ju, Yuko Nishiwaki, Wei-Chieh Chiang and Ichiro Masai. 2024. Male germ cell-associated kinase (MAK) is required for axoneme formation during ciliogenesis in zebrafish photoreceptors. Disease Models & Mechanisms. DOI
1,106. Morishita, Toshimasa, Naoto Nishizaki, Sakiko Taniguchi, Shinsuke Sakai, Tomonori Kimura, Masashi Mita, Mayu Nakagawa, Amane Endo, Yoshiyuki Ohtomo, Masato Yasui, Toshiaki Shimizu and Jumpei Sasabe. 2024. Plasma D-asparagine and the D/L-serine ratio reflect chronic kidney diseases in children regardless of physique. Amino Acids. DOI
1,105. Asai, Mitsuo, Satoko Honda, Nobuyuki Isshiki, Masahumi Takesue, Atsushi Hiraishi, Yamada. Mayu and Kuniharu Takei. 2023. Highly Stable, Flexible ISFET pH Sensor Using Sorted Semiconducting SWNTs in Aqueous Solution. Advanced Materials Technologies. DOI
1,104. Nishitsuji, Koki, Shinichiro Nagahama, Haruhi Narisoko, Kazuo Shimada, Nobuhiro Okada, Yuki Shimizu and Noriyuki Satoh. 2024. Possible monitoring of mesophotic scleractinian corals using an underwater mini-ROV to sample coral eDNA. Royal Society Open Science. DOI
1,103. Nakajima, Yuichi, Masako Nakamura, Hiromi Kayama Watanabe, Jun-Ichiro Ishibashi, Hiroyuki Yamamoto and Satoshi Mitarai. 2024. Ocean circulation contributes to genetic connectivity of limpet populations at deep-sea hydrothermal vents in a back-arc basin. Evolutionary Applications. DOI
1,102. Yurika, Ono, Tsuchida Shimpei, Hirasaka Katsuya, Myosho Taijun, Fujimoto Shingo, Shimizu Kenichi and Yagi Mitsuharu. 2024. Environmental DNA Reveals Geographic Distributions of Two eel Species, <i>Anguilla japonica</i> and <i>A. marmorata</i>, in Western Kyushu, Japan. Zoological Science. DOI
1,101. Setoguchi, Ruka, Tomoya Sengiku, Hiroki Kono, Eiryo Kawakami, Masato Kubo, Tadashi Yamamoto and Shohei Hori. 2024. Memory CD8 T cells are vulnerable to chronic IFN-γ signals but not to CD4 T cell deficiency in MHCII-deficient mice. Nature Communications. DOI